Summary
Name
Whole Genome Assembly and Annotation of Oryza punctata
Description

Protein-coding gene annotation was performed with evidence-based MAKER-P genome annotation pipeline. Non coding RNA genes were predicted with Infernal and tRNA genes with tRNAscan. RepeatMasker was used to annotate repeats and transposable elements with Oryza-specific de novo repeat libraries. These analyses were conducted at Arizona Genomics Institute (AGI) led by Dr. Rod Wing.

Program, Pipeline, Workflow or Method Name
Newbler and All Paths LG and Maker-P
Program Version
n/a
Organism
Date Performed
Friday, December 14, 2018 - 17:13
Data Source
Source Name
: Ensembl Plants and ENA
Source Version
: 51
Source URI
: http://ftp.ensemblgenomes.org/pub/plants/release-51/fasta/oryza_punctata/
Annotations
This record has the following annotations.
TermNameDefinition
EDAM:topic_0222Genome annotationAnnotation of a genome.