Genome sequencing and assembly of 12 rice varieties | Rice Genome Hub

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Summary

Name	Genome sequencing and assembly of 12 rice varieties
Description	Genome assemblies from 12 rice varieties (https://doi.org/10.1038/s41597-020-0438-2)
Program, Pipeline, Workflow or Method Name	Hybrid assembly method, using PacBio and Bionano data. See associated publication.
Program Version	n/a
Organism	Oryza sativa subsp. indica 1B2 var. PR106 (Oryza sativa indica 1B2 var. PR106) Oryza sativa subsp. indica 3B2 var. Liu Xu (Oryza sativa indica 3B2 var. Liu Xu) Oryza sativa subsp. japonica var. Chao Meo (Oryza sativa japonica var. Chao Meo) Oryza sativa subsp. indica 2A var. Gobol Sail (Oryza sativa indica 2A var. Gobol Sail) Oryza sativa subsp. indica 3A var. Lima ( Oryza sativa indica 3A var. Lima) Oryza sativa circum-Aus2 var. Natel Boro (Oryza sativa circum-Aus2 var. Natel Boro) Oryza sativa subsp. japonica var. Azucena (Oryza sativa japonica var. Azucena) Oryza sativa subsp. japonica var. Ketan Nangka (Oryza sativa japonica var. Ketan Nangka) Oryza sativa subsp. indica 1B1 var. IR64 (Oryza sativa indica 1B1 var. IR64) Oryza sativa subsp. indica 2B var. Larha Mugad (Oryza sativa indica 2B var. Larha Mugad) Oryza sativa subsp. indica 3B1 var. Khao Yai Guang (Oryza sativa indica 3B1 var. Khao Yai Guang) Oryza sativa circum-Basmati var. ARC 10497 (Oryza sativa circum-Basmati var. ARC 10497)
Date Performed	Tuesday, April 7, 2020 - 00:08
Data Source

Annotations

This record has the following annotations.
Term	Name	Definition
operation:0525	Sequence assembly (genome assembly)	Sequence assembly capable on a very large scale such as assembly of whole genomes. [http://edamontology.org]

Publication

Zhou, Y., Chebotarov, D., Kudrna, D. et al. A platinum standard pan-genome resource that represents the population structure of Asian rice. Sci Data 7, 113 (2020). https://doi.org/10.1038/s41597-020-0438-2

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