Jbrowse is a fast, scalable genome browser built completely with JavaScript and HTML5. For more information about this tool, visit Jbrowse.

Cite : Buels R et al. JBrowse: a dynamic web platform for genome visualization and analysis.Genome Biology (2016).

 

Available references

Species Version More information
Oryza sativa subsp. japonica cv. Nipponbare v7.1 (Update) MSU - RAP-DB
Oryza sativa subsp. japonica cv. Kitaake v1.0 Kitabase
Oryza sativa subsp. aus cv. N22 v1.0 International Oryza Map Alignment Project (IOMAP)
Oryza sativa subsp. indica cv. IR 8 v1.0 International Oryza Map Alignment Project (IOMAP)
Oryza sativa subsp. indica cv. Minghui 63 v3.0 (Update) RIGW
Oryza sativa subsp. indica cv. Shuhui498 (R498) v1.0 MBKBase
Oryza sativa subsp. indica cv. Zhenshan 97 v3.0 (Update) RIGW
Oryza glaberrima CG14 AGI1.1 OMAP
Oryza barthii v1 Oryza Genome Evolution (OGE) Project
Oryza rufipogon OR_W1943 Oryza Genome Evolution (OGE) Project
Oryza nivara v1 Oryza Genome Evolution (OGE) Project
Oryza meridionalis v1 Oryza Genome Evolution (OGE) Project
Oryza punctata v1 Oryza Genome Evolution (OGE) Project
Oryza brachyantha v1 Oryza Genome Evolution (OGE) Project
Oryza glumipatula v1.5 Oryza Genome Evolution (OGE) Project
Oryza sativa Nerica 4    
Oryza sativa Nerica L19    
Oryza sative subsp. basmati 334 v1.0 Zenodo page
Oryza sative subsp. basmati sadri Dom Sufid v1.0 Zenodo page