Browse
Jbrowse is a fast, scalable genome browser built completely with JavaScript and HTML5. For more information about this tool, visit Jbrowse.
Cite : Buels R et al. JBrowse: a dynamic web platform for genome visualization and analysis.Genome Biology (2016).
Available references
| Species | Version | More information |
|---|---|---|
| Oryza sativa subsp. japonica cv. Nipponbare | v7.1 (Update) | MSU - RAP-DB |
| Oryza sativa subsp. japonica cv. Kitaake | v1.0 | Kitabase |
| Oryza sativa subsp. aus cv. N22 | v1.0 | International Oryza Map Alignment Project (IOMAP) |
| Oryza sativa subsp. indica cv. IR 8 | v1.0 | International Oryza Map Alignment Project (IOMAP) |
| Oryza sativa subsp. indica cv. Minghui 63 | v3.0 (Update) | RIGW |
| Oryza sativa subsp. indica cv. Shuhui498 (R498) | v1.0 | MBKBase |
| Oryza sativa subsp. indica cv. Zhenshan 97 | v3.0 (Update) | RIGW |
| Oryza glaberrima CG14 | AGI1.1 | OMAP |
| Oryza barthii | v1 | Oryza Genome Evolution (OGE) Project |
| Oryza rufipogon | OR_W1943 | Oryza Genome Evolution (OGE) Project |
| Oryza nivara | v1 | Oryza Genome Evolution (OGE) Project |
| Oryza meridionalis | v1 | Oryza Genome Evolution (OGE) Project |
| Oryza punctata | v1 | Oryza Genome Evolution (OGE) Project |
| Oryza brachyantha | v1 | Oryza Genome Evolution (OGE) Project |
| Oryza glumipatula | v1.5 | Oryza Genome Evolution (OGE) Project |
| Oryza sativa Nerica 4 | ||
| Oryza sativa Nerica L19 | ||
| Oryza sative subsp. basmati 334 | v1.0 | Zenodo page |
| Oryza sative subsp. basmati sadri Dom Sufid | v1.0 | Zenodo page |
Rice GH is a collaborative project among rice teams from IRD & CIRAD. Funding has been provided by CRP Rice, IRD and CIRAD
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