Summary
Name
Oryza sativa subsp. japonica var. Chao Meo
Description
Taxonomy
Division
Plants and Fungi
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Infraspecific Taxon
varietas chao meo
Common Name
Oryza sativa japonica var. Chao Meo
Synonym
Oryza sativa (japonica cultivar-group)
Annotations
Publication
Zhou, Y., Chebotarov, D., Kudrna, D. et al. A platinum standard pan-genome resource that represents the population structure of Asian rice. Sci Data 7, 113 (2020). https://doi.org/10.1038/s41597-020-0438-2
Analysis
Analysis Table
Analyses
NameProgramDate Constructed
Whole Genome Assembly and Annotation of Asian rice (Zhou et al, 2020)MAKER-PJan 6th, 2020
InterPro (5.48-83.0) Annotations of Chao meoInterProScanApr 24th, 2021
Genome sequencing and assembly of 12 rice varietiesHybrid assembly method, using PacBio and Bionano data. See associated publication.Apr 6th, 2020