Dynamic and Coordinated Expression Changes of Rice Small RNAs in Response to Xanthomonas oryzae pv. oryzae

Dataset Name : Dynamic and Coordinated Expression Changes of Rice Small RNAs in Response to Xanthomonas oryzae pv. oryzae
Organism : O. Sativa Japonica Nipponbare
Unit : PHIM
Contact : Sebastien Cunnac (sebastien.cunnac@ird.fr)
Pipeline : Mapping against IRGSP1 genome. sRNA reads coverage--based inferrence of small RNA loci and identification of differentially expressed ones with Deseq2
Description : Examine the small RNA expression profiles of rice leaves at 2, 6, 12, and 24 hours post infection of Xanthomonas oryzae pv. oryzae (Xoo) virulent strain PXO99, the causal agent of rice bacterial blight disease.
Bioproject : https://www.ncbi.nlm.nih.gov/bioproject/PRJNA252424
Abreviation : CK=Mock inoculated leaf, Xoo=PXO99 inoculated leaf ; 12h=Time point after inoculation