©IRD - JB Bore / Epi de riz en serre, Vietnam
@IRD Guyot, Romain / Détails de panicules de riz africain (Oryza glaberrima)
©IRD - Carlet - Soulages, François
Available Tools
The Rice Genome Hub provides a serie of tools to browse, visualize and search among all data sets available.
Blast search
Search for highest similarity for your sequence of interest.
DIANE
Tool for RNA-seq data analyses, from raw count to gene regulatory network. Allow the user to...
Gene Search
Search for a gene by name, location, functional annotation keywords...
Primer Designer
Primer Designer allows users to design new target-specific primers in one step as well as to...
Primer Blaster
Check PCR primer specificity on any Rice Genome
Synteny Viewer
Explore synthenic and collinear blocks detected between Rice genomes
Sequences download
Download genes Sequences and promoter sequences from given gene list in fasta or GenBank/Embl...
Jbrowse
Allows users to navigate genome sequence, annotation, and associated data track sequence,...
Genomes
The Rice Genome Hub provides access to 22 genomes and their annotation. Analysis performed on these genomes have also been integrated.
Oryza glaberrima CG14
Oryza glaberrima (African rice) is a cultivated grain distinct read more
Oryza sativa basmati Basmati334
Basmati 334 (IRGC 27819; read more
Oryza sativa basmati sadri Dom Sufid
Dom Sufid (IRGC 117265; GeneSys passport: read more
Oryza sativa N22
The rice variety aus Nagina-22 (also know as N22) is read more
Oryza sativa indica IR8
IR8, world’s first high-yielding rice, turns 50
Oryza sativa indica MH63
Minghui 63 (MH63) contain a number of important agronomic traits read more
Oryza sativa indica R498
Rice (Oryza sativa, 2n=2x=24) is one of the most important crops read more
Rice GH is a collaborative project among rice teams from IRD & CIRAD. Funding has been provided by CRP Rice, IRD and CIRAD
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