Oryza glumipatula | Rice Genome Hub

Summary

Taxonomy

Ontology

Analysis

Summary

Name	Oryza glumipatula
Description	Oryza glumipatula is a wild rice from South America, one of the rice species included in the OMAP project. It belongs to the AA genome group and has 12 chromosomes with a nuclear genome size of 464 Mb (flow cytometry). It is found in deep and sometimes flowing water. Source : Ensembl Plants

Taxonomy

Division	Plants and Fungi
Lineage	cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Infraspecific Taxon	glumipatula
Common Name	Oryza glumipatula

Annotations

Publication

JC Stein, et al. Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza. Nature Genetics volume 50, pages 285–296 (2018)

Analysis

Analysis Table

Analyses

Name	Program	Date Constructed
Whole Genome Assembly and Annotation of Oryza glumipatula	Allpaths-LG, SSPACE, GapFiller, MAKER-P	Dec 14th, 2019

Rice GH is a collaborative project among rice teams from IRD & CIRAD. Funding has been provided by CRP Rice, IRD and CIRAD

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