Available references
- Oryza sativa subsp. japonica
- Oryza sativa aus
- WIld Rice
- Oryza sativa x Oryza glaberrima
- Oryza sativa circum-basmati
- Oryza sativa subsp. indica
| Species | JBrowse | More information | Prefix | Example | |
|---|---|---|---|---|---|
| Oryza sativa subsp. japonica | |||||
| cv. Nipponbare | v7.1 (Update) | MSU | LOC_ | LOC_Os10g14020.1 | |
| cv. Nipponbare | 2020-12-02 | RAP-DB | Os | Os01t0100100-01 | |
| cv. Kitaake | v1.0 | Kitabase | OsKitaake | OsKitaake10g201000.1 | |
| subtrop Chao Meo | v1.0 | Oryza Gramene | Os132278_ | Os132278_01g0000010.01 | |
| trop1 Azucena | v1.0 | Oryza Gramene | Osazucena_ | Osazucena_01g0000010.01 | |
| trop2 Ketan Nangka | v1.0 | Oryza Gramene | Os128077_ | Os128077_01g0000010.01 | |
| Oryza sativa aus | |||||
| cv. N22 | v1.0 | International Oryza Map Alignment Project (IOMAP) | A2J10_ | A2J10_04T0127800.1 | |
| cv. Natel_Boro | v1.0 | Oryza Gramene | Os127652_ | Os127652_01g0000010.01 | |
| Wild Rice | |||||
| Oryza glaberrima CG14 | AGI_PacBIO | AGI | Oglab_ | Oglab_000001-RA | |
| Oryza barthii | AGI_PacBIO | AGI | Obart_ | Obart_000001-RA | |
| Oryza rufipogon | OR_W1943 | Oryza Genome Evolution (OGE) Project | ORUFI | ORUFI01G00010.1 | |
| Oryza nivara | v1 | Oryza Genome Evolution (OGE) Project | ONIVA | ONIVA01G00010.1 | |
| Oryza meridionalis | v1 | Oryza Genome Evolution (OGE) Project | OMERI | OMERI01G00010.1 | |
| Oryza punctata | v1 | Oryza Genome Evolution (OGE) Project | OPUNC | OPUNC01G00010.1 | |
| Oryza brachyantha | v1 | Oryza Genome Evolution (OGE) Project | OB | OB0037G10010.1 | |
| Oryza glumipatula | v1.5 | Oryza Genome Evolution (OGE) Project | OGLUM | OGLUM01G00010.1 | |
| Oryza sativa x Oryza glaberrima | |||||
| Oryza sativa Nerica 4 | 1.0 | AfricaRice | Nerica4_ | Nerica4_01t000010 | |
| Oryza sativa Nerica L19 | 1.0 | AfricaRice | NericaL19_ | NericaL19_00t000010 | |
| Oryza sativa circum-basmati | |||||
| ARC10497 | v1.0 | Oryza Gramene | Os117425_ | Os117425_01g0000010.01 | |
| basmati 334 | v1.0 | Zenodo page | B3_ | B3_01t000010 | |
| basmati sadri Dom Sufid | v1.0 | Zenodo page | DS | DS_01t000010 | |
| Oryza sativa indica | |||||
| 1B1 IR64 | v1.0 | Oryza Gramene | Osir64_ | Osir64_01g0000010.01 | |
| cv. IR 8 | v1.0 | International Oryza Map Alignment Project (IOMAP) | OsIR8_ | OsIR8_10T0123600.1 | |
| cv. Minghui 63 | v3.0 (Update) | RIGW | OsMH_ | OsMH_03T0282800.9 | |
| cv. Shuhui498 (R498) | v1.0 | MBKBase | OsR498 | OsR498G0100000400.01.T01 | |
| cv. Zhenshan 97 | v3.0 (Update) | RIGW | OsZS_ | OsZS_03T0555300.1 | |
| 1B2 PR106 | v1.0 | Oryza Gramene | Os127742_ | Os127742_01g0000010.01 | |
| 2A Gobol Sail | v1.0 | Oryza Gramene | Os132424_ | Os132424_01g0000010.01 | |
| 2B Larha Mugad | v1.0 | Oryza Gramene | Os125619_ | Os125619_01g0000010.01 | |
| 3B1 Khao Yai Guang | v1.0 | Oryza Gramene | Os127518_ | Os127518_01g0000010.01 | |
| 3A Lima | v1.0 | Oryza Gramene | Os127564_ | Os127564_01g0000010.01 | |
| 3B2 Liu Xu | v1.0 | Oryza Gramene | Os125827_ | Os125827_01g0000010.01 | |
Rice GH is a collaborative project among rice teams from IRD & CIRAD. Funding has been provided by CRP Rice, IRD and CIRAD
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