Whole Genome Assembly and Annotation of Oryza sativa (v7.1) | Rice Genome Hub

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Summary

Name	Whole Genome Assembly and Annotation of Oryza sativa (v7.1)
Description	This is MSU Release 7.0 of the annotation of the genome of the Nipponbare/ japonica subspecies of Oryza sativa . This release is based on a new pseudomolecule assembly (Os-Nipponbare-Reference-IRGSP-1.0) made in collaboration with the Agrogenomics Research Center at the National Institute of Agrobiological Sciences, Tsukuba, Japan. This set of pseudomolecules unifies the previous MSU with the IRGSP/RAP effort.
Program, Pipeline, Workflow or Method Name	Performed by MSU
Program Version	7
Organism	Oryza sativa subsp. japonica cv. Nipponbare (Oryza sativa japonica Nipponbare)
Date Performed	Thursday, July 12, 2018 - 13:43
Data Source	Source Name : MSU assembly/annotation v7

Annotations

This record has the following annotations.
Term	Name	Definition
EDAM:topic_0222	Genome annotation	Annotation of a genome.

Publication

Kawahara Y, de la Bastide M, Hamilton JP, et al. Improvement of the Oryza sativa Nipponbare reference genome using next generation sequence and optical map data. Rice. 2013;6:4.

Rice GH is a collaborative project among rice teams from IRD & CIRAD. Funding has been provided by CRP Rice, IRD and CIRAD

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