Whole Genome Assembly and Annotation of IR8 | Rice Genome Hub

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Summary

Name	Whole Genome Assembly and Annotation of IR8
Description	This data package contains processed data from the International Oryza Map Alignment Project (IOMAP) covering annotation and comparative genomics in 13 species of the Oryzeae tribe in relation to the following reference genome assemblies; Oryza sativa vg. indica [IR 8], Oryza sativa vg. aus [N 22], Oryza sativa vg. japonica [IRGSP-1.0], Oryza sativa vg. indiac [93-11], Oryza nivara, Oryza rufipogon, Oryza barthii, Oryza glaberrima, Oryza glumaepatula, Oryza meridionalis, Oryza punctata, Oryza brachyantha & Leersia perrieri.
Program, Pipeline, Workflow or Method Name	Maker
Program Version	1
Organism	Oryza sativa subsp. indica cv. IR 8 (Oryza sativa indica IR8)
Date Performed	Friday, September 21, 2018 - 16:10
Data Source	Source Name : IOMAP Source URI : https://dx.doi.org/10.7946/P2FC9Z

Annotations

This record has the following annotations.
Term	Name	Definition
EDAM:topic_0222	Genome annotation	Annotation of a genome.

Publication

JC Stein, et al. Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza. Nature Genetics volume 50, pages 285–296 (2018)

Rice GH is a collaborative project among rice teams from IRD & CIRAD. Funding has been provided by CRP Rice, IRD and CIRAD

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