Summary
Name
Oryza sativa subsp. indica cv. Shuhui498
Description

Rice (Oryza sativa, 2n=2x=24) is one of the most important crops in the world, grouped into two subspecies: indica and japonica.
As a high-quality reference genome for the indica cultivars group was still needed, the cultivar R498 was sequenced to provide for this need.

Properties
Division
Plants and Fungi
Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Genbank Common Name
long-grained rice
Infraspecific Taxon
cultivar Shuhui498
Common Name
Oryza sativa indica R498
Other Name
  • Indian rice
  • Indica rice
  • Oryza sp. Poi-6
Synonym
  • Oryza sativa (indica cultivar-group)
  • Oryza sativa (indica group)
  • Oryza sativa subsp. indica
Publication
Publication: 
Du H, Yu Y, Ma Y, et al. Sequencing and de novo assembly of a near complete indica rice genome. Nature Communications. 2017;8:15324
Jbrowse
JBrowse Instance: 

Please see the MBKbase page for more details about this genome assembly.

Go to JBrowse

Analysis
Analysis Table
Analyses
NameProgramDate Constructed
Whole Genome Assembly and Annotation of R498MBKBaseSep 7th, 2018